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Atomic fluorescence spectrometry with volatile species generation - a sensitive tool for ultra-trace elemental analysis
Štádlerová, Barbora ; Musil, Stanislav (advisor) ; Spěváčková, Věra (referee) ; Dočekalová, Hana (referee)
This thesis encompasses a development of innovative methodologies based on atomic fluorescence spectrometry, offering precise and sensitive determination of ultra-trace elements, such as bismuth, cadmium, and nickel. The common denominator of all parts of this work is the use of a research-grade non-dispersive atomic fluorescence spectrometer (AFS). First part of this work is dedicated to the development of a highly sensitive methodology for bismuth determination based on hydride generation (HG) coupled with AFS. Bismuthane was generated by the reaction with NaBH4 in HCl medium in a flow injection arrangement and directed by a stream of carrier argon and hydrogen to an atomizer. A detailed optimization of the optical path of the spectrometer (electrodeless discharge lamp, lenses and interference filter) and atomization parameters in two flame atomizers - miniature diffusion flame (MDF) and flame-in-gas-shield atomizer (FIGS) - was performed. An excellent repeatability and extremely low limits of detection were achieved, namely 1.8 ng L−1 with the MDF and 0.9 ng L−1 with the FIGS. Subsequently, a photochemical vapour generation (PVG) of bismuth was coupled to AFS, employing a flow injection arrangement of the generator, a standard mercury low-pressure UV lamp and a coiled Teflon reactor. A flow rate...
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Synthesis and properties of transition metal carbides
Nedvědová Šolcová, Pavlína ; Tyrpekl, Václav (advisor) ; Zákutná, Dominika (referee)
This master thesis is a follow-up of my bachelor's project, where the goal was to prepare high entropy carbide (HEC), namely (Ti, Zr, Hf, Nb, Ta)C, by the sol-gel method followed by carbothermal reduction using spark plasma sintering facility (SPS). In this work, the first aim is to substitute SPS with ultra-fast high-temperature sintering (UHS) for the same HEC, (Ti, Zr, Hf, Nb, Ta)C. The advantages of UHS compared to SPS are a thousand times lower consumption of electricity and simpler set-up. The second aim is the adaptation of the synthesis for the preparation of HEC of different compositions, (Cr, Mn, Fe, Co, Ni)C. The third aim is the testing of the presented sol-gel technique on the production of borides, while the initial experiments were focused on boro- carbothermal reduction. Keywords: high entropy carbides, high entropy borides, transition metals, carbothermal reduction, high-temperature ceramics, sol-gel method
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Metal-Ion Selectivity from Quantum-Chemical Perspective
Gutten, Ondrej ; Rulíšek, Lubomír (advisor) ; Dudev, Todor (referee) ; Baldauf, Carsten (referee)
Metal ions are a tempting tool for organisms thanks to the diversity of func- tions they have to offer, if they can be distinguished properly. Examining metal-ion selectivity computationally is challenging mainly due to complex- ity of electronic structure and solvation effects. A DFT-based protocol for predicting metal-ion selectivity of metal-binding systems was developed. The most essential part of the thesis is discussion of the magnitudes and sources of inherent errors, both for metal-ion complexes and small peptides. The thesis connects the work of four original papers. It includes computational and ex- perimental benchmarks, a case-study validating the computational protocol for obtaining energetic and structural insights, and attempts applying the protocol to peptidic systems. ii
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Responsive Contrast Agents for Magnetic Resonance Imaging (MRI)
Krchová, Tereza ; Kotek, Jan (advisor) ; Marek, Radek (referee) ; Platas-Iglesias, Carlos (referee)
ABSTRACT This work is focused on the synthesis of a family of new macrocyclic ligands with exchangeable protons on coordinating groups that could potentially serve (after complexation with suitable paramagnetic lanthanide(III) ions) as responsive contrast agents (CAs) for magnetic resonance imaging (MRI). It is expected that measurement of extracellular pH should bring information for tumorous disease diagnoses and/or for suggesting the most efficient treatment. Therefore, our attention was focused on pH-dependent CAs based on a PARAmagnetic Chemical Exchange Saturation Transfer (PARACEST) mechanism capable of reporting pH changes in tissue. The PARACEST-related properties of a series of Ln(III) complexes with the CEST effect caused by amino groups coordinated to the central Ln(III) metal ions were investigated. Such a kind of PARACEST CA is new and has had no precedent in the literature. It was shown that these Ln(III) complexes produce a pH-sensitive PARACEST effect in the pH region relevant for living systems. The study brings proof-of-principle for utilization of complexes with a linear diamine pendant arm, i.e. complexes with two exchanging proton pools, for ratiometric pH determination by MRI independently on the probe concentration. In addition, to ensure a higher kinetic inertness of the...
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Magnetic anisotropies in (Ga,Mn)As and metallic multilayers with strong spin-orbit coupling
Zemen, Jan ; Jungwirth, Tomáš (advisor) ; Diviš, Martin (referee) ; Šob, Mojmír (referee)
The thesis presents a numerical study of magnetocrystalline anisotropies in dilute ferromagnetic semiconductors and transition metal systems intended to advance the current understanding of the microscopic origins of this relativistic effect and to contribute to the development of spintronic devices with new functionalities. The major part of the work surveys magnetocrystalline anisotropies in (Ga,Mn)As epilayers and compares the calculations to available experimental data. Our model is based on an envelope function description of the valence band holes and a spin representation for their kinetic-exchange interaction with localised electrons on Mn2+ ions, treated in the mean-field approximation. For epilayers with growth induced lattice-matching strains we study in-plane to out-of-plane easy axis reorientations as a function of Mn local-moment concentration, hole concentration, and temperature. Next we focus on the competition of in-plane cubic and uniaxial anisotropies. We add an in-plane shear strain to the effective Hamiltonian in order to capture measured data in bare, unpatterned epilayers, and we provide microscopic justification for this approach. The model is then extended by an in-plane uniaxial strain and used to directly describe experiments with magnetisation direction controlled by...
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Coordination chemistry of pharmaceuticals
Malová, Zuzana ; Lukeš, Ivan (advisor) ; Vojtíšek, Pavel (referee)
Present methods for diagnosis of neurodegenerative diseases are rather limited and in clinical practise are missing. This thesis is focused on utilization of the positron emission tomography using isotope 64 Cu(II). For the project, two contrast agents were proposed containing ligand for Cu (II) coordination and thioflavine T derivative as fluorescent dye, also as a targeting compound. Structure of the thioflavine T derivative was defined by X-ray structural analysis. The selected fluorescent dye has a high affinity for incipient amyloids and, when bound to their structure, has enhanced fluorescent properties. The proposed ligands are tetraazacyclic. The first one is a diamide, where the thioflavin T derivative is part of a macrocyclic ring. The second selected ligand is linked to the thioflavin T derivative via a linker. Key words: complexes; pharmaceuticals; transition metals
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Synthesis of unsymmetric DOTA derivatives and study of their complexes
Obuch, Jakub ; Hermann, Petr (advisor) ; Drahoš, Bohuslav (referee)
Lanthanide(III) complexes are compounds with both diagnostic and therapeutic applications. For diagnostic applications, they are used as contrast agents for imaging techniques such as MRI, PET or SPECT. In therapy, complexes of beta or alpha particle- emitting radionuclides are used. If the complexes contain protonable groups, their behaviour is dependent on pH of the solution. Protonation of these groups should occur close to the physiological pH. If the efficiency (relaxivity) of the MRI contrast agent is dependent on protonation state, this method can be used for determination of pH of tissues in vivo. For radiopharmaceuticals, fast complexation of short-lived metal radionuclides is important and protonation might significantly accelerate the complex formation. For therapeutic applications, possibility of labelling at low temperatures when heat-sensitive biovectors (e.g. antibodies) do not decompose. To assess the effect of protonation of amino group in the vicinity of the metal ion, amino-bis(phosphinate) pendant arm was proposed, where the dissociation constant of the amino group below the physiological pH can be expected. Three ligands containing this group and DO3A fragment were prepared and their complexes were studied to assess aforementioned possible uses in medicine. Their structure and...
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Responsive Contrast Agents for Magnetic Resonance Imaging (MRI)
Krchová, Tereza
ABSTRACT This work is focused on the synthesis of a family of new macrocyclic ligands with exchangeable protons on coordinating groups that could potentially serve (after complexation with suitable paramagnetic lanthanide(III) ions) as responsive contrast agents (CAs) for magnetic resonance imaging (MRI). It is expected that measurement of extracellular pH should bring information for tumorous disease diagnoses and/or for suggesting the most efficient treatment. Therefore, our attention was focused on pH-dependent CAs based on a PARAmagnetic Chemical Exchange Saturation Transfer (PARACEST) mechanism capable of reporting pH changes in tissue. The PARACEST-related properties of a series of Ln(III) complexes with the CEST effect caused by amino groups coordinated to the central Ln(III) metal ions were investigated. Such a kind of PARACEST CA is new and has had no precedent in the literature. It was shown that these Ln(III) complexes produce a pH-sensitive PARACEST effect in the pH region relevant for living systems. The study brings proof-of-principle for utilization of complexes with a linear diamine pendant arm, i.e. complexes with two exchanging proton pools, for ratiometric pH determination by MRI independently on the probe concentration. In addition, to ensure a higher kinetic inertness of the...
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Gold-Catalyzed Cyclizations of 1,5-Enynes
Matouš, Petr ; Pour, Milan (advisor) ; Hlaváč, Jan (referee) ; Veselý, Jan (referee)
Charles University, Faculty of Pharmacy in Hradec Králové Department Department of Organic and Bioorganic Chemistry Candidate Mgr. Petr Matouš Supervisor prof. RNDr. Milan Pour, Ph.D. Titel of Doctoral Thesis Gold-Catalyzed Cyclizations of 1,5-Enynes This Ph.D. thesis deals with the development of gold(I)-catalyzed cyclizations of propargylamino acrylates (3-aza-1,5-enynes) in the presence of an external nucleophile. A library of tetrahydropyridines with an unusual hemiaminal ether functional group was thus prepared via the cyclization of a series of substituted enynes. The influence of the protective group as well as the substitution on the chemoselectivity of the reaction was demonstrated. The tetrahydropyridines were further utilized as precursors for the preparation of pharmaceutically important nitrogen heterocycles. The reduction of selected compounds furnished substituted piperidines, while Diels-Alder cycloaddition of alkenylated tetrahydropyridines gave rise to isoquinoline derivatives. Additional ortho-fused heterocycles (furopyridine, pyrrolopyridine and chromenopyridine) were prepared by the intramolecular version of the cyclizations of enynes with pending internal nucleophiles.
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Coordination chemistry of pharmaceuticals
Malová, Zuzana ; Lukeš, Ivan (advisor) ; Vojtíšek, Pavel (referee)
Present methods for diagnosis of neurodegenerative diseases are rather limited and in clinical practise are missing. This thesis is focused on utilization of the positron emission tomography using isotope 64 Cu(II). For the project, two contrast agents were proposed containing ligand for Cu (II) coordination and thioflavine T derivative as fluorescent dye, also as a targeting compound. Structure of the thioflavine T derivative was defined by X-ray structural analysis. The selected fluorescent dye has a high affinity for incipient amyloids and, when bound to their structure, has enhanced fluorescent properties. The proposed ligands are tetraazacyclic. The first one is a diamide, where the thioflavin T derivative is part of a macrocyclic ring. The second selected ligand is linked to the thioflavin T derivative via a linker. Key words: complexes; pharmaceuticals; transition metals
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